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ISSN: 2333-9721
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BMC Genetics

ISSN Print: 1471-2156

ISSN Online:

主页: http://www.biomedcentral.com/bmcgenet

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Regions of XY homology in the pig X chromosome and the boundary of the pseudoautosomal region

Skinner Benjamin M,Lachani Kim,Sargent Carole A,Affara Nabeel A

A missense mutation in growth differentiation factor 9 (GDF9) is strongly associated with litter size in sheep

V？ge Dag I,Husdal Maren,Kent Matthew P,Klemetsdal Gunnar

Long term persistence of clonal malaria parasite Plasmodium falciparum lineages in the Colombian Pacific region

Echeverry Diego F,Nair Shalini,Osorio Lyda,Menon Sanjay

The rhesus macaque is three times as diverse but more closely equivalent in damaging coding variation as compared to the human

Qiaoping Yuan, Zhifeng Zhou, Stephen G Lindell, J Dee Higley, Betsy Ferguson, Robert C Thompson, Juan F Lopez, Stephen J Suomi, Basel Baghal, Maggie Baker, Deborah C Mash, Christina S Barr, David Goldman

Mapping quantitative trait loci for kernel composition in almond

Carolina Font i Forcada, Angel Fernández i Martí, Rafel Socias i Company

Molecular organization and chromosomal localization of 5S rDNA in Amazonian Engystomops (Anura, Leiuperidae)

Débora Rodrigues, Miryan Rivera, Luciana Louren？o

Molecular diversity, population structure, and linkage disequilibrium in a worldwide collection of tobacco (Nicotiana tabacum L.) germplasm

Agostino Fricano, Nicolas Bakaher, Marcello Corvo, Pietro Piffanelli, Paolo Donini, Alessandra Stella, Nikolai V Ivanov, Carlo Pozzi

Fine mapping of a linkage peak with integration of lipid traits identifies novel coronary artery disease genes on chromosome 5

Daniel K Nolan, Beth Sutton, Carol Haynes, Jessica Johnson, Jacqueline Sebek, Elaine Dowdy, David Crosslin, David Crossman, Michael H Sketch, Christopher B Granger, David Seo, Pascal Goldschmidt-Clermont, William E Kraus, Simon G Gregory, Elizabeth R Hauser, Svati H Shah

A synthetic rainbow trout linkage map provides new insights into the salmonid whole genome duplication and the conservation of synteny among teleosts

René Guyomard, Mekki Boussaha, Francine Krieg, Caroline Hervet, Edwige Quillet

Late blight resistance gene from Solanum ruiz-ceballosii is located on potato chromosome X and linked to violet flower colour

Jadwiga ？liwka, Henryka Jakuczun, Marcin Chmielarz, Agnieszka Hara-Skrzypiec, Iga Tomczyńska, Andrzej Kilian, Ewa Zimnoch-Guzowska

Sequencing genes in silico using single nucleotide polymorphisms

Xinyi Zhang, Bo Zhang, Shuying Li, Xin Huang, John A Hansen, Lue Zhao

Assessing the joint effect of population stratification and sample selection in studies of gene-gene (environment) interactions

KF Cheng, JY Lee

UPDG: Utilities package for data analysis of Pooled DNA GWAS

Daniel WH Ho, Maurice KH Yap, Shea Ping Yip

Efficiency of genomic selection using Bayesian multi-marker models for traits selected to reflect a wide range of heritabilities and frequencies of detected quantitative traits loci in mice

Dagmar NRG Kapell, Daniel Sorensen, Guosheng Su, Luc LG Janss, Cheryl J Ashworth, Rainer Roehe

Linkage disequilibrium and inbreeding estimation in Spanish Churra sheep

Elsa Garcia-Gamez, Goutam Sahana, Beatriz Gutierrez- Gil, Juan-Jose Arranz

Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation

Sen Li, Mattias Jakobsson

Genetic characterization of Plectorhinchus mediterraneus yields important clues about genome organization and evolution of multigene families

Manuel A Merlo, Tiziana Pacchiarini, Silvia Portela-Bens, Ismael Cross, Manuel Manchado, Laureana Rebordinos

Genome-wide linkage analysis of QTL for growth and body composition employing the PorcineSNP60 BeadChip

Ana Isabel Fernández, Dafne Pérez-Montarelo, Carmen Barragán, Yuliaxis Ramayo-Caldas, Noelia Iba？ez-Escriche, Anna Castelló, Jose Luis Noguera, Luis Silió, Josep María Folch, M Carmen Rodríguez

Genetic divergence and the genetic architecture of complex traits in chromosome substitution strains of mice

Sabrina H Spiezio, Toyoyuki Takada, Toshihiko Shiroishi, Joseph H Nadeau

Association between GNRHR, LHR and IGF1 polymorphisms and timing of puberty in male Angus cattle

Juan P Lirón, Alberto J Prando, María E Fernández, María V Ripoli, Andrés Rogberg-Mu？oz, Daniel E Goszczynski, Diego M Posik, Pilar Peral-García, Andrés Baldo, Guillermo Giovambattista

The distribution of a germline methylation marker suggests a regional mechanism of LINE-1 silencing by the piRNA-PIWI system

Martin I Sigurdsson, Albert V Smith, Hans T Bjornsson, Jon J Jonsson

Chromosome differentiation patterns during cichlid fish evolution

Andréia B Poletto, Irani A Ferreira, Diogo C Cabral-de-Mello, Rafael T Nakajima, Juliana Mazzuchelli, Heraldo B Ribeiro, Paulo C Venere, Mauro Nirchio, Thomas D Kocher, Cesar Martins

CpGPAP: CpG island predictor analysis platform

Li-Yeh Chuang, Cheng-Huei Yang, Ming-Cheng Lin, Cheng-Hong Yang

Weighted selective collapsing strategy for detecting rare and common variants in genetic association study

Yilin Dai, Renfang Jiang, Jianping Dong

The B chromosome of the cichlid fish Haplochromis obliquidens harbors 18S rRNA genes

Andréia B Poletto, Irani A Ferreira, Cesar Martins

Genetic analysis of ancestry, admixture and selection in Bolivian and Totonac populations of the New World

W Scott Watkins, Jinchuan Xing, Chad Huff, David J Witherspoon, Yuhua Zhang, Ugo A Perego, Scott R Woodward, Lynn B Jorde

A novel linkage map of sugarcane with evidence for clustering of retrotransposon-based markers

Alessandra C Palhares, Taislene B Rodrigues-Morais, Marie-Anne Van Sluys, Douglas S Domingues, Walter Maccheroni, Hamilton Jord？o, Anete P Souza, Thiago G Marconi, Marcelo Mollinari, Rodrigo Gazaffi, Antonio Augusto F Garcia, Maria Lucia Carneiro Vieira

Association of single nucleotide polymorphic sites in candidate genes with aggressiveness and deoxynivalenol production in Fusarium graminearum causing wheat head blight

Firas Talas, Tobias Würschum, Jochen C Reif, Heiko K Parzies, Thomas Miedaner

Leading the way: finding genes for neurologic disease in dogs using genome-wide mRNA sequencing

Elaine A Ostrander, Holly Beale

Nucleotide variability and linkage disequilibrium patterns in the porcine MUC4 gene

Ming Yang, Bin Yang, Xueming Yan, Jing Ouyang, Weihong Zeng, Huashui Ai, Jun Ren, Lusheng Huang

Enhancing the usability and performance of structured association mapping algorithms using automation, parallelization, and visualization in the GenAMap software system

Ross E Curtis, Anuj Goyal, Eric P Xing

Categorization of 77 dystrophin exons into 5 groups by a decision tree using indexes of splicing regulatory factors as decision markers

Rusdy Malueka, Yutaka Takaoka, Mariko Yagi, Hiroyuki Awano, Tomoko Lee, Ery Dwianingsih, Atsushi Nishida, Yasuhiro Takeshima, Masafumi Matsuo

Molecular ecology and selection in the drought-related Asr gene polymorphisms in wild and cultivated common bean (Phaseolus vulgaris L.)

Andrés J Cortés, Carolina M Chavarro, Santiago Madri？án, Dominique This, Matthew W Blair

Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland

Brian K Meredith, Francis J Kearney, Emma K Finlay, Daniel G Bradley, Alan G Fahey, Donagh P Berry, David J Lynn

Loss of nonsense mediated decay suppresses mutations in Saccharomyces cerevisiae TRA1

Stephanie Kvas, Gregory B Gloor, Christopher J Brandl

Putative resistance gene markers associated with quantitative trait loci for fire blight resistance in Malus ‘Robusta 5’ accessions

Susan E Gardiner, John L Norelli, Nihal de Silva, Gennaro Fazio, Andreas Peil, Mickael Malnoy, Mary Horner, Deepa Bowatte, Charmaine Carlisle, Claudia Wiedow, Yizhen Wan, Carole L Bassett, Angela M Baldo, Jean-Marc Celton, Klaus Richter, Herb S Aldwinckle, Vincent G M Bus

Microsatellites reveal a strong subdivision of genetic structure in Chinese populations of the mite Tetranychus urticae Koch (Acari: Tetranychidae)

Jing-Tao Sun, Chunlan Lian, Maria Navajas, Xiao-Yue Hong

Ascertaining gene flow patterns in livestock populations of developing countries: a case study in Burkina Faso goat

Amadou Traoré, Isabel álvarez, Iván Fernández, Lucía Pérez-Pardal, Adama Kaboré, Gisèlle MS Ouédraogo-Sanou, Yacouba Zaré, Hamidou H Tambourá, Félix Goyache

Ancient DNA reveals kinship burial patterns of a pre-Columbian Andean community

Mateusz Baca, Karolina Doan, Maciej Sobczyk, Anna Stankovic, Piotr Weglenski

Statistical properties of interval mapping methods on quantitative trait loci location: impact on QTL/eQTL analyses

Xiaoqiang Wang, Hélène Gilbert, Carole Moreno, Olivier Filangi, Jean-Michel Elsen, Pascale Le Roy

Comparative karyotype analysis and chromosome evolution in the genus Aplastodiscus (Cophomantini, Hylinae, Hylidae)

Simone Lilian Gruber, Juliana Zina, Hideki Narimatsu, Célio Fernando Baptista Haddad, Sanae Kasahara

Mitochondrial DNA paradox: sex-specific genetic structure in a marine mussel – despite maternal inheritance and passive dispersal

Peter R Teske, Isabelle Papadopoulos, Nigel P Barker, Christopher D McQuaid

Genome-wide association study identified three major QTL for carcass weight including the PLAG1-CHCHD7 QTN for stature in Japanese Black cattle

Shota Nishimura, Toshio Watanabe, Kazunori Mizoshita, Ken Tatsuda, Tatsuo Fujita, Naoto Watanabe, Yoshikazu Sugimoto, Akiko Takasuga

EggLib: processing, analysis and simulation tools for population genetics and genomics

Stéphane De Mita, Mathieu Siol

Genomic scan of selective sweeps in thin and fat tail sheep breeds for identifying of candidate regions associated with fat deposition

Mohammad Hossein Moradi, Ardeshir Nejati-Javaremi, Mohammad Moradi-Shahrbabak, Ken G Dodds, John C McEwan

ParentChecker: a computer program for automated inference of missing parental genotype calls and linkage phase correction

Zhiqiu Hu, Jeffrey D Ehlers, Philip A Roberts, Timothy J Close, Mitchell R Lucas, Steve Wanamaker, Shizhong Xu

An R package "VariABEL" for genome-wide searching of potentially interacting loci by testing genotypic variance heterogeneity

Maksim V Struchalin, Najaf Amin, Paul HC Eilers, Cornelia M van Duijn, Yurii S Aulchenko

An Expressed Sequence Tag (EST)-enriched genetic map of turbot (Scophthalmus maximus): a useful framework for comparative genomics across model and farmed teleosts

Carmen Bouza, Miguel Hermida, Belén G Pardo, Manuel Vera, Carlos Fernández, Roberto de la Herrán, Rafael Navajas-Pérez, José Antonio álvarez-Dios, Antonio Gómez-Tato, Paulino Martínez

Genome-wide mRNA sequencing of a single canine cerebellar cortical degeneration case leads to the identification of a disease associated SPTBN2 mutation

Oliver P Forman, Luisa De Risio, Jennifer Stewart, Cathryn S Mellersh, Elsa Beltran

Model-specific tests on variance heterogeneity for detection of potentially interacting genetic loci

Ludwig A Hothorn, Ondrej Libiger, Daniel Gerhard

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