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ISSN: 2333-9721
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BMC Medical Genomics

ISSN Print: 1755-8794

ISSN Online:

主页: http://www.biomedcentral.com/bmcmedgenomics

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Multilocus loss of DNA methylation in individuals with mutations in the histone H3 Lysine 4 Demethylase KDM5C

Grafodatskaya Daria,Chung Barian HY,Butcher Darci T,Turinsky Andrei L

Next-generation text-mining mediated generation of chemical response-specific gene sets for interpretation of gene expression data

Hettne Kristina M,Boorsma André,van Dartel Dorien A M,Goeman Jelle J

Breast cancer subtyping from plasma proteins

Zhang Fan,Chen Jake Y

Adipose tissue gene expression analysis reveals changes in inflammatory, mitochondrial respiratory and lipid metabolic pathways in obese insulin-resistant subjects

Jarkko Soronen, Pirkka-Pekka Laurila, Jussi Naukkarinen, Ida Surakka, Samuli Ripatti, Matti Jauhiainen, Vesa M Olkkonen, Hannele Yki-J？rvinen

Evaluation of the imputation performance of the program IMPUTE in an admixed sample from Mexico City using several model designs

S Krithika, Adán Valladares-Salgado, Jesus Peralta, Jorge Escobedo-de La Pe？a, Jesus Kumate-Rodríguez, Miguel Cruz, Esteban J Parra

The role of disease characteristics in the ethical debate on personal genome testing

Eline M Bunnik, Maartje HN Schermer, A Cecile JW Janssens

Global analysis of DNA methylation in early-stage liver fibrosis

Yoko Komatsu, Tsuyoshi Waku, Naoya Iwasaki, Wakana Ono, Chie Yamaguchi, Junn Yanagisawa

Identification of genetic risk variants for deep vein thrombosis by multiplexed next-generation sequencing of 186 hemostatic/pro-inflammatory genes

Luca A Lotta, Mark Wang, Jin Yu, Ida Martinelli, Fuli Yu, Serena M Passamonti, Dario Consonni, Emanuela Pappalardo, Marzia Menegatti, Steven E Scherer, Lora L Lewis, Humeira Akbar, Yuanqing Wu, Matthew N Bainbridge, Donna M Muzny, Pier M Mannucci, Richard A Gibbs, Flora Peyvandi

Molecular prediction for atherogenic risks across different cell types of leukocytes

Feng Cheng, Ellen C Keeley, Jae K Lee

An in silico analysis of dynamic changes in microRNA expression profiles in stepwise development of nasopharyngeal carcinoma

Zhaohui Luo, Liyang Zhang, Zheng Li, Xiayu Li, Gang Li, Haibo Yu, Chen Jiang, Yafei Dai, Xiaofang Guo, Juanjuan Xiang, Guiyuan Li

High-throughput detection of aberrant imprint methylation in the ovarian cancer by the bisulphite PCR-Luminex method

Hitoshi Hiura, Hiroaki Okae, Hisato Kobayash, Naoko Miyauchi, Fumi Sato, Akiko Sato, Fumihiko Suzuki, Satoru Nagase, Junichi Sugawara, Kunihiko Nakai, Nobuo Yaegashi, Takahiro Arima

DNA methylation differences at growth related genes correlate with birth weight: a molecular signature linked to developmental origins of adult disease?

Nahid Turan, Mohamed F Ghalwash, Sunita Katari, Christos Coutifaris, Zoran Obradovic, Carmen Sapienza

Genes associated with MUC5AC expression in small airway epithelium of human smokers and non-smokers

Guoqing Wang, Zhibo Xu, Rui Wang, Mohammed Al-Hijji, Jacqueline Salit, Yael Strulovici-Barel, Ann Tilley, Jason Mezey, Ronald Crystal

Hybridization and amplification rate correction for affymetrix SNP arrays

Quan Wang, Pei C Peng, Min P Qian, Lin Wan, Ming H Deng

Genomic signatures for predicting survival and adjuvant chemotherapy benefit in patients with non-small-cell lung cancer

Ryan K Van Laar

Skeletal muscle alterations and exercise performance decrease in erythropoietin-deficient mice: a comparative study

Laurence Mille-Hamard, Veronique L Billat, Elodie Henry, Blandine Bonnamy, Florence Joly, Philippe Benech, Eric Barrey

A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease

Nalini Raghavachari, Jennifer Barb, Yanqin Yang, Poching Liu, Kimberly Woodhouse, Daniel Levy, Chris O'Donnell, Peter J Munson, Gregory Kato

Network analysis identifies a putative role for the PPAR and type 1 interferon pathways in glucocorticoid actions in asthmatics

Diego Diez, Susumu Goto, John V Fahy, David J Erle, Prescott G Woodruff, ？sa M Wheelock, Craig E Wheelock

Screening significantly hypermethylated genes in fetal tissues compared with maternal blood using a methylated-CpG island recovery assay-based microarray

Aihua Yin, Xiangzhong Zhang, Jing Wu, Li Du, Tianwen He, Xiaozhuang Zhang

MicroRNA expression signature in human abdominal aortic aneurysms

Matthew C Pahl, Kimberly Derr, Gabor G？bel, Irene Hinterseher, James R Elmore, Charles M Schworer, Thomas C Peeler, David P Franklin, John L Gray, David J Carey, Gerard Tromp, Helena Kuivaniemi

Relation between smoking history and gene expression profiles in lung adenocarcinomas

Johan Staaf, G？ran J？nsson, Mats J？nsson, Anna Karlsson, Sofi Isaksson, Annette Salomonsson, Helen M Pettersson, Maria Soller, Sven-B？rje Ewers, Leif Johansson, Per J？nsson, Maria Planck

Batch correction of microarray data substantially improves the identification of genes differentially expressed in Rheumatoid Arthritis and Osteoarthritis

Peter Kupfer, Reinhard Guthke, Dirk Pohlers, René Huber, Drik Koczan, Raimund W. Kinne

MicroRNA profiling of a CD133+ spheroid-forming subpopulation of the OVCAR3 human ovarian cancer cell line

Eun Ji Nam, Maria Lee, Ga Won Yim, Jae Hoon Kim, Sunghoon Kim, Sang Wun Kim, Young Tae Kim

Visualization and identification of health space, based on personalized molecular phenotype and treatment response to relevant underlying biological processes

Jildau Bouwman, Jack TWE Vogels, Suzan Wopereis, Carina M Rubingh, Sabina Bijlsma, Ben van Ommen

Routine use of microarray-based gene expression profiling to identify patients with low cytogenetic risk acute myeloid leukemia: accurate results can be obtained even with suboptimal samples

Diane Raingeard de la Blétière, Odile Blanchet, Pascale Cornillet-Lefèbvre, Anne Coutolleau, Laurence Baranger, Franck Geneviève, Isabelle Luquet, Mathilde Hunault-Berger, Annaelle Beucher, Aline Schmidt-Tanguy, Marc Zandecki, Yves Delneste, Norbert Ifrah, Philippe Guardiola

Identification of genes with a correlation between copy number and expression in gastric cancer

Lei Cheng, Ping Wang, Sheng Yang, Yanqing Yang, Qing Zhang, Wen Zhang, Huasheng Xiao, Hengjun Gao, Qinghua Zhang

Interaction among apoptosis-associated sequence variants and joint effects on aggressive prostate cancer

Nicole A Lavender, Erica N Rogers, Susan Yeyeodu, James Rudd, Ting Hu, Jie Zhang, Guy N Brock, Kevin S Kimbro, Jason H Moore, David W Hein, La Creis R Kidd

Novel biomarker combination improves the diagnosis of serious bacterial infections in Malawian children

Adam D Irwin, Fiona Marriage, Limangeni A Mankhambo, IPD Study Group, Graham Jeffers, Ruwanthi Kolamunnage-Dona, Malcolm Guiver, Brigitte Denis, Elizabeth M Molyneux, Malcolm E Molyneux, Philip J Day, Enitan D Carrol

Fibroblasts from phenotypically normal palmar fascia exhibit molecular profiles highly similar to fibroblasts from active disease in Dupuytren's Contracture

Latha Satish, William A LaFramboise, Sandra Johnson, Linda Vi, Anna Njarlangattil, Christina Raykha, John Michael Krill-Burger, Phillip H Gallo, David B O'Gorman, Bing Gan, Mark E Baratz, Garth D Ehrlich, Sandeep Kathju

A target based approach identifies genomic predictors of breast cancer patient response to chemotherapy

Robin M Hallett, Gregory Pond, John A Hassell

Molecular diagnostics for congenital hearing loss including 15 deafness genes using a next generation sequencing platform

Sarah De Keulenaer, Jan Hellemans, Steve Lefever, Jean-Pierre Renard, Joachim De Schrijver, Hendrik Van de Voorde, Mohammad Amin Tabatabaiefar, Filip Van Nieuwerburgh, Daisy Flamez, Filip Pattyn, Bieke Scharlaken, Dieter Deforce, Sofie Bekaert, Wim Van Criekinge, Jo Vandesompele, Guy Van Camp, Paul Coucke

Saliva samples are a viable alternative to blood samples as a source of DNA for high throughput genotyping

Jean E Abraham, Mel J Maranian, Inmaculada Spiteri, Roslin Russell, Susan Ingle, Craig Luccarini, Helena M Earl, Paul DP Pharoah, Alison M Dunning, Carlos Caldas

LINE-1 methylation status and its association with tetralogy of fallot in infants

Wei Sheng, Jun H Wang, Jing X Ma, Yan Y Qian, Ping Zhang, Yao Wu, Yun F Zheng, Long Chen, Ying G Huang, Duan Ma

Association of differential gene expression with imatinib mesylate and omacetaxine mepesuccinate toxicity in lymphoblastoid cell lines

Kulkarni Hemant,G？ring Harald H H,Diego Vincent,Cole Shelley

Mutation screen in the GWAS derived obesity gene SH2B1 including functional analyses of detected variants

Volckmar Anna-Lena,Bolze Florian,Jarick Ivonne,Knoll Nadja

Correlations of gene expression with ratings of inattention and hyperactivity/impulsivity in tourette syndrome: a pilot study

Tian Yingfang,Stamova Boryana,Ander Bradley P,Jickling Glen C

Candidate gene association study in pediatric acute lymphoblastic leukemia evaluated by Bayesian network based Bayesian multilevel analysis of relevance

Lautner-Csorba Orsolya,Gézsi András,Semsei ágnes F,Antal Péter

The effects of MicroRNA transfections on global patterns of gene expression in ovarian cancer cells are functionally coordinated

Shahab Shubin W,Matyunina Lilya V,Hill Christopher G,Wang Lijuan

Approaches to informed consent for hypothesis-testing and hypothesis-generating clinical genomics research

Facio Flavia M,Sapp Julie C,Linn Amy,Biesecker Leslie G

Association of genetic polymorphisms with chronic obstructive pulmonary disease in the Chinese Han population: a case–control study

Guo Yi,Gong Yi,Pan Chunming,Qian Yanrong

Noninvasive Fetal Trisomy (NIFTY) test: an advanced noninvasive prenatal diagnosis methodology for fetal autosomal and sex chromosomal aneuploidies

Jiang Fuman,Ren Jinghui,Chen Fang,Zhou Yuqiu

Soft tissue sarcoma subtypes exhibit distinct patterns of acquired uniparental disomy

Tuna Musaffe,Ju Zhenlin,Amos Christopher I,Mills Gordon B

A direct comparison of next generation sequencing enrichment methods using an aortopathy gene panel- clinical diagnostics perspective

Wooderchak-Donahue Whitney L,O’Fallon Brendan,Furtado Larissa V,Durtschi Jacob D

Completion of the swine genome will simplify the production of swine as a large animal biomedical model

Walters Eric M,Wolf Eckhard,Whyte Jeffery J,Mao Jiude

Defining the genomic signature of the parous breast

Peri Suraj,de Cicco Ricardo,Santucci-Pereira Julia,Slifker Michael

Polymorphism in glutamate cysteine ligase catalytic subunit (GCLC) is associated with sulfamethoxazole-induced hypersensitivity in HIV/AIDS patients

Wang Danxin,Curtis Amanda,Papp Audrey C,Koletar Susan L

Integrative analysis of neuroblastoma and pheochromocytoma genomics data

Szabó Peter M,Pintér Miklós,Szabó Diana,Zsippai Adrienn

Identification and characterization of alternative exon usage linked glioblastoma multiforme survival

Sadeque Ahmed,Ser？o Nicola VL,Southey Bruce R,Delfino Kristin R

Mitochondrial proteomics of nasopharyngeal carcinoma metastasis

Liu Jianping,Zhan Xianquan,Li Maoyu,Li Guoqing

Systematically characterizing and prioritizing chemosensitivity related gene based on Gene Ontology and protein interaction network

Chen Xin,Jiang Wei,Wang Qianghu,Huang Teng

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