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Comparison of different methods to obtain and store liver biopsies for molecular and histological research

DOI: 10.1186/1476-5926-8-3

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Abstract:

RNA quality was best guaranteed by the combination of a Menghini biopsy with NaCl, followed by RNAlater preservation and RNAeasy mini kit extraction. These results were confirmed by quantitative RT-PCR testing. Reliable histological assessment for copper proved only possible in formalin fixed liver tissue. Short formalin fixation (1–4 hrs) improved immunohistochemical reactivity and preservation of good morphology in small liver biopsies.At least two biopsies (RNAlater and formalin) are needed. Since human and canine liver diseases are highly comparable, it is conceivable that the protocols described here can be easily translated into the human biomedical field.Expression profiling can be used for disease classification, predictions of clinical outcome or the molecular dissection of affected pathways in hereditary or acquired diseases. Animal models for human diseases facilitate cause-effect studies under controlled conditions and allow comparison with untreated or healthy individuals. Especially the latter can be an ethical or logistic problem in human medicine. More than 300 genetic human disorders are described in dogs http://www.ncbi.nlm.nih.gov/sites/entrez webcite. Many of these diseases occur in one or just a few of around 400 dog breeds. Single gene diseases are easy to characterize in inbred dog populations, and research of complex diseases profits from the fact that dogs share the human environment. In addition to similarities between dogs and humans with respect to physiology, pathobiology, and treatment response, research of breed-related canine behaviour and phenotypic diversity is promising. Therefore dogs were advocated as a model animal in translational research [1]. Molecular genetic tools available for such comparable research between dogs and humans include the in-depth sequencing of the complete dog genome [2,3], a single-nucleotide polymorphism (SNP) data base, containing 2.5 million SNPs [4], and easy access to genetic information of several ge

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