Yersinia enterocolitica is a foodborne pathogen that causes illness in humans and animals. The biotype 4/O:3 has been commonly associated with yersiniosis and is characterized by the presence of chromosomal and extra-chromosomal virulence genes. Molecular typing methods have been successfully used to characterize Y. enterocolitica genetic heterogeneity and to study the epidemiology of the bacteria from different origins. In this study, 320 Y. enterocolitica biotype 4/O:3 isolates originating in pigs and slaughterhouses were characterized according to the virulence profile, and 61 isolates were typified through SE-AFLP, ERIC-PCR, and PFGE techniques. The majority of the isolates originated from pigs, and the predominant virulence profile was ail+ virF+ rfbC+ ystA+, representing 83.4% of the tested isolates. All of the Y. enterocolitica 4/O:3 isolates were positive for at least ystA gene. The SE-AFLP and ERIC-PCR patterns were highly homogeneous. The SE-AFLP was more discriminative than the ERIC-PCR and tended to cluster isolates according to the slaughterhouse. Despite the limited genetic diversity of Y. enterocolitica 4/O:3, PFGE was shown to be the most discriminative technique considering one band of difference. Fattening pigs proved to be an important reservoir of Y. enterocolitica biotype 4/O:3 carrying virulence genes. 1. Introduction Yersinia enterocolitica is an important zoonotic foodborne pathogen that can cause acute diarrhea, terminal ileitis, and mesenteric lymphadenitis in humans and animals [1, 2]. The isolates largely responsible for human yersiniosis in Europe, Japan, Canada, and the USA belong to biotype 4/O:3 [1]. The epidemiology of the disease is not completely known. The pig is considered the only reservoir from which pathogenic Y. enterocolitica isolates, such as biotype 4/O:3, have been frequently isolated [1]. The prevalence of this biotype in pig slaughterhouses has been reported to be 56% in Finland [3] and 60% in southern Germany [4]. Serotype O:3 is predominant among the isolates recovered from slaughter pigs in the USA [5]. Martínez et al. [6] reported that fattening pigs seem to be an important reservoir of pathogenic Y. enterocolitica in Belgium, Italy, and Spain. The virulence of the pathogenic biotype 4/O:3 is attributed to the presence of chromosomal and extrachromosomal genes. The plasmid for Yersinia virulence (pYV) encodes the adhesin A (YadA), the Yersinia outer proteins (Yops) from type III secretion system, and the transcriptional regulator gene (virF) [7, 8]. The chromosomal virulence genes include inv (invasin),
References
[1]
E. J. Bottone, “Yersinia enterocolitica: overview and epidemiologic correlates,” Microbes and Infection, vol. 1, pp. 323–333, 1999.
[2]
R. M. Robins-Browne, “Yersinia enterocolitica,” in Food Microbiology: Fundamentals and Frontiers, M. P. Doyle, L. R. Beuchat, and T. J. Montiville, Eds., pp. 215–245, American Society for Microbiology Press, 2001.
[3]
T. Korte, M. Fredriksson-Ahomaa, T. Niskanen, and H. Korkeala, “Low prevalence of yadA-positive Yersinia enterocolitica in sows,” Foodborne Pathogens and Disease, vol. 1, no. 1, pp. 45–52, 2004.
[4]
M. Fredriksson-Ahomaa, M. Bucher, C. Hank, A. Stolle, and H. Korkeala, “High prevalence of Yersinia enterocolitica 4:O3 on pig offal in Southern Germany: a slaughtering technique problem,” Systematic and Applied Microbiology, vol. 24, no. 3, pp. 457–463, 2001.
[5]
S. Bhaduri and I. Wesley, “Isolation and characterization of Yersinia enterocolitica from swine feces recovered during the National Animal Health Monitoring System Swine 2000 study,” Journal of Food Protection, vol. 69, no. 9, pp. 2107–2112, 2006.
[6]
P. O. Martínez, M. Fredriksson-Ahomaa, A. Pallotti, R. Rosmini, K. Houf, and H. Korkeala, “Variation in the prevalence of enteropathogenic Yersinia in slaughter pigs from Belgium, Italy, and Spain,” Foodborne Pathogens and Disease, vol. 8, pp. 445–450, 2011.
[7]
G. R. Cornelis, A. Boland, A. P. Boyd et al., “The virulence plasmid of Yersinia, an antihost genome,” Microbiology and Molecular Biology Reviews, vol. 62, no. 4, pp. 1315–1352, 1998.
[8]
G. R. Cornelis, “The Yersinia YSC-Yop “type III” weaponry,” Nature Reviews Molecular Cell Biology, vol. 3, pp. 742–752, 2001.
[9]
P. A. Revell and V. L. Miller, “Yersinia virulence: more than a plasmid,” FEMS Microbiology Letters, vol. 205, pp. 159–164, 2001.
[10]
J. P. Falc?o, D. P. Falc?o, A. Pitondo-Silva, A. C. Malaspina, and M. Brocchi, “Molecular typing and virulence markers of Yersinia enterocolitica strains from human, animal and food origins isolated between 1968 and 2000 in Brazil,” Journal of Medical Microbiology, vol. 55, no. 11, pp. 1539–1548, 2006.
[11]
P. Sachdeva and J. S. Virdi, “Repetitive elements sequence (REP/ERIC)-PCR based genotyping of clinical and environmental strains of Yersinia enterocolitica biotype 1A reveal existence of limited number of clonal groups,” FEMS Microbiology Letters, vol. 240, no. 2, pp. 193–201, 2004.
[12]
I. Iteman, A. Guiyoule, and E. Carniel, “Comparison of three molecular methods for typing and subtyping pathogenic Yersinia enterocolitica strains,” Journal of Medical Microbiology, vol. 45, no. 1, pp. 48–56, 1996.
[13]
L. Wojciech, Z. Staroniewicz, A. Jakubczak, and M. Ugorski, “Typing of Yersinia enterocolitica isolates by ITS profiling, REP- And ERIC-PCR,” Journal of Veterinary Medicine Series B, vol. 51, no. 5, pp. 238–244, 2004.
[14]
M. Fredriksson-Ahomaa, A. Stolle, A. Siitonen, and H. Korkeala, “Sporadic human Yersinia enterocolitica infections caused by bioserotype 4/O:3 originate mainly from pigs,” Journal of Medical Microbiology, vol. 55, no. 6, pp. 747–749, 2006.
[15]
R. Paix?o, L. Z. Moreno, D. D. S. Gobbi et al., “Characterization of Yersinia enterocolitica biotype 1A strains isolated from swine slaughterhouses and markets,” The Scientific World Journal, vol. 2013, Article ID 769097, 6 pages, 2013.
[16]
R. A. Souza, D. P. Falc?o, and J. P. Falc?o, “Emended description of Yersinia massiliensis,” International Journal of Systematic and Evolutionary Microbiology, vol. 61, pp. 1094–1097, 2011.
[17]
R. Boom, C. J. A. Sol, and M. M. M. Salimans, “Rapid and simple method for purification of nucleic acids,” Journal of Clinical Microbiology, vol. 28, pp. 459–453, 1990.
[18]
S. Thisted Lambertz and M. L. Danielsson-Tham, “Identification and characterization of pathogenic Yersinia enterocolitica isolates by PCR and pulsed-field gel electrophoresis,” Applied and Environmental Microbiology, vol. 71, no. 7, pp. 3674–3681, 2005.
[19]
J. McLauchlin, G. Ripabelli, M. M. Brett, and E. J. Threlfall, “Amplified fragment length polymorphism (AFLP) analysis of Clostridium perfringens for epidemiological typing,” International Journal of Food Microbiology, vol. 56, no. 1, pp. 21–28, 2000.
[20]
J. Versalovic, T. Koeuth, and J. R. Lupski, “Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes,” Nucleic Acids Research, vol. 19, no. 24, pp. 6823–6831, 1991.
[21]
M. Rafiee, M. Bara, C. P. Stephens, and P. J. Blackall, “Application of ERIC-PCR for the comparison of isolates of Haemophilus parasuis,” Australian Veterinary Journal, vol. 78, no. 12, pp. 846–849, 2000.
[22]
A. van Belkum, P. T. Tassios, L. Dijkshoorn et al., “Guidelines for the validation and application of typing methods for use in bacterial epidemiology,” Clinical Microbiology and Infection, vol. 13, no. 3, pp. 1–46, 2007.
[23]
P. R. Hunter and M. A. Gaston, “Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity,” Journal of Clinical Microbiology, vol. 26, no. 11, pp. 2465–2466, 1988.
[24]
L. Bari, M. A. Hossain, K. Isshiki, and D. Ukuku, “Behavior of Yersinia enterocolitica in Foods,” Journal of Pathogens, vol. 2011, Article ID 420732, 13 pages, 2011.
[25]
M. Fredriksson-Ahomaa, A. Stolle, and H. Korkeala, “Molecular epidemiology of Yersinia enterocolitica infections,” FEMS Immunology and Medical Microbiology, vol. 47, no. 3, pp. 315–329, 2006.
[26]
V. L. Miller, J. J. Farmer III, W. E. Hill, and S. Falkow, “The aid locus is found uniquely in Yersinia enterocolitica serotypes commonly associated with disease,” Infection and Immunity, vol. 57, no. 1, pp. 121–131, 1989.
[27]
D. A. Tadesse, P. B. Bahnson, J. A. Funk et al., “Yersinia enterocolitica of porcine origin: carriage of virulence genes and genotypic diversity,” Foodborne Pathogens and Disease, vol. 10, 2013.
[28]
V. Weynants, V. Jadot, P. A. Denoel, A. Tibor, and J. J. Letesson, “Detection of Yersinia enterocolitica serogroup O:3 by a PCR method,” Journal of Clinical Microbiology, vol. 34, no. 5, pp. 1224–1227, 1996.
[29]
C. Fearnley, S. L. On, B. Kokotovic, G. Manning, T. Cheasty, and D. G. Newell, “Application of fluorescent amplified fragment length polymorphism for comparison of human and animal isolates of Yersinia enterocolitica,” Applied Environmental Microbiology, vol. 71, pp. 4960–4965, 2005.
[30]
M. Fredriksson-Ahomaa, T. Autio, and H. Korkeala, “Efficient subtyping of Yersinia enterocolitica bioserotype 4/O:3 with pulsed-field gel electrophoresis,” Letters in Applied Microbiology, vol. 29, no. 5, pp. 308–312, 1999.