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-  2019 

Human and Extracellular DNA Depletion for Metagenomic Analysis of Complex Clinical Infection Samples Yields Optimized Viable Microbiome Profiles

DOI: https://doi.org/10.1016/j.celrep.2019.01.091

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Abstract:

? Human and extracellular bacterial DNA can bias metagenomic sequencing ? Hypotonic lysis, endonuclease digestion limit human and extracellular bacterial DNA ? Reducing extracellular DNA optimizes metagenomic sequencing of viable bacterial cells ? Increased microbial sequencing coverage improves detection of important gene

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