全部 标题 作者
关键词 摘要

OALib Journal期刊
ISSN: 2333-9721
费用:99美元

查看量下载量

相关文章

更多...

Colistin Resistance Profiles, Molecular Investigation of mcr-1 and mcr-2 Plasmid Genes and Investigation of Carbapenemase Production in Pseudomonas and Acinetobacter Strains

DOI: 10.4236/ojmm.2023.134022, PP. 276-291

Keywords: Pseudomonas, Acinetobacter, Carbapenemase, Colistin, Suceptibility

Full-Text   Cite this paper   Add to My Lib

Abstract:

Background and Purpose: The reintroduction of colistin as a last resort treatment against multi-resistant Gram-negative bacilli, is currently challenged by the emergence of colistin-resistant bacteria. The aim of this study was to assess the susceptibility of Pseudomonas and Acinetobacter strains to colistin, to identify carbapenemase production, and to investigate the plasmid genes involved in colistin resistance and carbapenemase production. Methodology: In order to establish the susceptibility profiles of 17 strains of Pseudomonas and Acinetobacter to colistin, their Minimum Inhibitory Concentrations (MICs) were determined using the liquid microdilution method. The possible production of carbapenemases was investigated with the modified Carbapenem Inactivation Method (mCIM). The search for genes encoding carbapenemases (blaOXA, blaIMP, blaCarba) and those responsible for plasmid resistance to colistin (mcr-1 and mcr-2) was performed by conventional PCR. Results and Conclusion: Ninety-four percent (94%) (16/17) of the strains were resistant to colistin. Intraspecies distribution was 50% (8/16), 31% (5/16), 13% (2/16) and 6% (1/16) for Acinetobacter baumannii, Pseudomonas aeruginosa, Pseudomonas luteola, and Pseudomonas fluorescens, respectively. Twenty-nine percent (29%) (6/17) of the strains produced carbapenemases. No mcr-1 and mcr-2 plasmid genes were detected. On the other hand, 17.6% (3/17) of the strains possessed the carbapenemase genes distributed as follows: Carba type (60%), OXA type (40%) and IMP type (0%). The results of this study highlight a high resistance to colistin in strains belonging to the genera Acinetobacter and Pseudomonas, and some of these strains produce carbapenemases.

References

[1]  Pérez, J., Contreras-Moreno, F.J., Marcos-Torres, F.J., Moraleda-Muñoz, A. and Muñoz-Dorado, J. (2020) The Antibiotic Crisis: How Bacterial Predators Can Help. Computational and Structural Biotechnology Journal, 18, 2547-2555.
https://doi.org/10.1016/j.csbj.2020.09.010
[2]  Dortet, L., Bonnin, R., Jousset, A., Gauthier, L. and Naas, T. (2016) émergence de la résistance à la colistine chez les Entérobactéries: Une brèche dans le dernier rempart contre La pan-résistance ! Journal des Anti-Infectieux, 18, 139-159.
https://doi.org/10.1016/j.antinf.2016.09.003
[3]  Nordmann, P. (2010) Résistance aux carbapénèmes chez les bacilles à Gram négatif. Medecine Sciences, 11, 950-956.
https://doi.org/10.1051/medsci/20102611950
[4]  Papp-Wallace, K.M., Endimiani, A., Taracila, M.A. and Bonomo, R.A. (2011) Carbapenems: Past, Present, and Future. Antimicrobial Agents and Chemotherapy, 55, 4943-4960.
https://doi.org/10.1128/AAC.00296-11
[5]  Yoon, E.J. and Jeong, S.H. (2021) Mobile Carbapenemase Genes in Pseudomonas aeruginosa. Frontiers in Microbiology, 12, Article 614058.
https://doi.org/10.3389/fmicb.2021.614058
[6]  Nordmann, P. and Poirel, L. (2019) Epidemiology and Diagnostics of Carbapenem Resistance in Gram-Negative Bacteria. Clinical Infectious Diseases, 69, S521-S528.
https://doi.org/10.1093/cid/ciz824
[7]  Lechantre, R. (2017) Résistance à la colistine chez les bactéries à gram-négatif. NOSO INFO.
[8]  Carretto, E., Brovarone, F., Russello, G., Nardini, P., El-Bouseary, M.M., Aboklaish, A.F., et al. (2018) Clinical Validation of SensiTest Colistin, a Broth Microdilution-Based Method to Evaluate Colistin MICs. Journal of Clinical Microbiology, 56, e01523-17.
https://doi.org/10.1128/JCM.01523-17
[9]  Ahmed, M.A.E.E., Zhong, L.L., Shen, C., Yang, Y., Doi, Y. and Tian, G. (2020) Colistin and Its Role in the Era of Antibiotic Resistance : An Extended Review (2000-2019). Emerging Microbes and Infections, 9, 868-885.
https://doi.org/10.1080/22221751.2020.1754133
[10]  Andrade, F.F., Silva, D., Rodrigues, A. and Pina-Vaz, C. (2020) Colistin Update on Its Mechanism of Action and Resistance, Present and Future Challenges. Microorganisms, 8, Article 1716.
https://doi.org/10.3390/microorganisms8111716
[11]  Liu, Y., Wang, Y., Walsh, T.R., Yi, L., Zhang, R., Spencer, J., et al. (2015) Emergence of Plasmid-Mediated Colistin Resistance Mechanism MCR-1 in Animals and Human Beings in China : A Microbiological and Molecular Biological Study. The Lancet Infectious Diseases, 16, 161-168.
[12]  Ling, Z., Yin, W., Shen, Z., Wang, Y., Shen, J. and Walsh, T.R. (2020) Epidemiology of Mobile Colistin Resistance Genes mcr-1 to mcr-9. Journal of Antimicrobial Chemotherapy, 75, 3087-3095.
https://doi.org/10.1093/jac/dkaa205
[13]  Ahmed, Z.S., Elshafiee, E.A., Khalefa, H.S., Kadry, M. and Hamza, D.A. (2019) Evidence of Colistin Resistance Genes (mcr-1 and mcr-2) in Wild Birds and Its Public Health Implication in Egypt. Antimicrobial Resistance and Infection Control, 8, Article No. 197.
https://doi.org/10.1186/s13756-019-0657-5
[14]  Zhang, J., Chen, L., Wang, J., Yassin, A.K., Butaye, P., Kelly, P., et al. (2018) Molecular Detection of Colistin Resistance Genes (mcr-1, mcr-2 and mcr-3) in Nasal/Oropharyngeal and Anal/Cloacal Swabs from Pigs and Poultry. Scientific Reports, 8, Article No. 3705.
https://doi.org/10.1038/s41598-018-22084-4
[15]  Giani, T., Arena, F., Vaggelli, G., Conte, V., Chiarelli, A., De Angelis, L. H., Rossolini, G.M., et al. (2015) Large Nosocomial Outbreak of Colistin-Resistant, Carbapenemase-Producing Klebsiella pneumoniae Traced to Clonal Expansion of an mgrB Deletion Mutant. Journal of Clinical Microbiology, 53, 3341-3344.
https://doi.org/10.1128/JCM.01017-15
[16]  Zhang, H., Zhang, J., Kang, Y., Yang, Q. and Xu, Y. (2020) Analysis of Susceptibilities of Carbapenem Resistant Enterobacterales to Colistin in Intra-Abdominal, Respiratory and Urinary Tract Infections from 2015 to 2017. Infection and Drug Resistance, 13, 1937-1948.
https://doi.org/10.2147/IDR.S250384
[17]  Yala, J.F., Mabika, R.M., Mounioko, F., Minko, O.Z., Lepengue, A.N. and Souza, A. (2020) In vitro Antibacterial Activity of an Aqueous Extracts of the Tephrosia vogelii Hook.f Combined to Imipenem on E. coli Strains. Scholars Academic Journal of Pharmacy, 9, 36-45.
https://doi.org/10.36347/sajp.2020.v09i01.008
[18]  Mabika Mabika, R., Mounioko, F., Wenceslas Mboumba, L., Souza, A. and Fabrice Yala, J. (2020) Phenotypic Characterization of the Resistance of Salmonella—Shigella Isolates to Colistin and Detection of mcr1/2 Genes. Journal of Applied Biosciences, 156, 16132-16138.
https://doi.org/10.35759/JABs.156.6
[19]  Mosquito, S., Ruiz, J., Pons, M.J., Durand, D., Barletta, F. and Ochoa, T.J. (2012) Molecular Mechanisms of Antibiotic Resistance in Diarrhoeagenic Escherichia coli Isolated from Children. International Journal of Antimicrobial Agents, 40, 544-548.
https://doi.org/10.1016/j.ijantimicag.2012.07.021
[20]  Zhang, J., Wang, J., Chen, L., Yassin, A.K., Kelly, P., Butaye, P., et al. (2018) Housefly (Musca domestica) and Blow Fly (Protophormia terraenovae) as Vectors of Bacteria Carrying Colistin Resistance Genes. Applied and Environmental Microbiology, 84, e01736-17.
https://doi.org/10.1128/AEM.01736-17
[21]  Mohanty, S., Maurya, V., Gaind, R. and Deb, M. (2013) Phenotypic Characterization and Colistin Susceptibilities of Carbapenem-Resistant of Pseudomonas aeruginosa and Acinetobacter spp. Journal of Infection in Developing Countries, 7, 880-887.
https://doi.org/10.3855/jidc.2924
[22]  Tilouch, L., Sakly, H., Boughattas, S., Gargouri, M., Abdelaziz, A., Ben, Chaouch, C. and Boujaafar, N. (2020) Profil et sensibilité aux antibiotiques des bactéries isolées au service des brulés. Médecine et Maladies Infectieuses, 47, S76.
https://doi.org/10.1016/j.medmal.2017.03.186
[23]  Bradford, P.A., Kazmierczak, K.M., Biedenbach, D.J., Wise, M.G., Hackel, M. and Sahm, D.F. (2016) Correlation of β-Lactamase Production and Colistin Resistance among Enterobacteriaceae Isolates from a Global Surveillance Program. Antimicrobial Agents and Chemotherapy, 60, 1385-1392.
https://doi.org/10.1128/AAC.01870-15
[24]  Frye, J.G. and Jackson, C.R. (2013) Genetic Mechanisms of Antimicrobial Resistance Identified in Salmonella enterica, Escherichia coli, and Enteroccocus spp. Isolated from U.S. Food Animals. Frontiers in Microbiology, 4, Article 36485.
https://doi.org/10.3389/fmicb.2013.00135
[25]  Moubareck, C.A. (2020) Polymyxins and Bacterial Membranes : A Review of Antibacterial Activity and Mechanisms of Resistance. Membranes, 10, Article 181.
https://doi.org/10.3390/membranes10080181
[26]  Xu, Y., Zhong, L.L., Srinivas, S., Sun, J., Huang, M., Paterson, D.L., et al. (2018) Spread of MCR-3 Colistin Resistance in China: An Epidemiological, Genomic and Mechanistic Study. EBioMedicine, 34, 139-157.
https://doi.org/10.1016/j.ebiom.2018.07.027
[27]  Carroll, L.M., Gaballa, A., Guldimann, C., Sullivan, G., Henderson, L.O. and Wiedmanna, M. (2019) Identification of Novel Mobilized Colistin Resistance Gene mcr-9 in a Multidrug-Resistant, Colistin-Susceptible Salmonella enterica Serotype Typhimurium Isolate. mBio, 10, e00853-19.
https://doi.org/10.1128/mBio.00853-19
[28]  Wang, C., Feng, Y., Liu, L., Wei, L., Kang, M. and Zong, Z. (2020) Identification of Novel Mobile Colistin Resistance Gene mcr-10. Emerging Microbes and Infections, 9, 508-516.
https://doi.org/10.1080/22221751.2020.1732231
[29]  Beceiro, A., Llobet, E., Bengoechea, A., Doumith, M., Hornsey, M., Dhanji, H., et al. (2011) Phosphoethanolamine Modification of Lipid A in Colistin-Resistant Variants of Acinetobacter baumannii Mediated by the pmrAB Two-Component Regulatory System. Antimicrobial Agents and Chemotherapy, 55, 3370-3379.
https://doi.org/10.1128/AAC.00079-11
[30]  Collignon, P., Beggs, J.J., Walsh, T.R., Gandra, S. and Laxminarayan, R. (2018) Anthropological and Socioeconomic Factors Contributing to Global Antimicrobial Resistance: A Univariate and Multivariable Analysis. The Lancet Planetary Health, 2, e398-e405.
https://doi.org/10.1016/S2542-5196(18)30186-4
[31]  Coskun, U.S.S., Caliskan, E., Cicek, A.C., Turumtay, H. and Sandalli, C. (2019) β-Lactamase Genes in Carbapenem Resistance Acinetobacter Baumannii Isolates from a Turkish University Hospital. Journal of Infection in Developing Countries, 13, 50-55.
https://doi.org/10.3855/jidc.10556
[32]  Dally, S., Lemuth, K., Kaase, M., Rupp, S., Knabbe, C. and Weile, J. (2013) DNA Microarray for Genotyping Antibiotic Resistance Determinants in Acinetobacter baumannii Clinical Isolates. Antimicrobial Agents and Chemotherapy, 57, 4761-4768.
https://doi.org/10.1128/AAC.00863-13
[33]  Lin, J., Xu, C., Fang, R., Cao, J., Zhang, X., Zhao, Y., et al. (2019) Resistance and Heteroresistance to Colistin in Pseudomonas aeruginosa Isolates from Wenzhou, China. Antimicrobial Agents and Chemotherapy, 63, e00556-19.
https://doi.org/10.1128/AAC.00556-19
[34]  Adjagodo, A., Agassounon Djikpo Tchibozo, M., Kelome, N.C. and Lawani, R. (2016) Flux des polluants liés aux activités anthropiques, risques sur les ressources en eau de surface et la chaine trophique à travers le monde : Synthèse bibliographique. International Journal of Biological and Chemical Sciences, 10, 1459-1472.
https://doi.org/10.4314/ijbcs.v10i3.43
[35]  Hameed, F., Khan, M.A., Muhammad, H., Sarwar, T., Bilal, H. and Rehman, T.U. (2019) Plasmid-Mediated mcr-1 Gene in Acinetobacter baumannii and Pseudomonas aeruginosa: First Report from Pakistan. Revista da Sociedade Brasileira de Medicina Tropical, 52, e20190237.
https://doi.org/10.1590/0037-8682-0237-2019
[36]  Ma, F., Shen, C., Zheng, X., Liu, Y., Chen, H., Zhong, L., et al. (2019) Identification of a Novel Plasmid Carrying mcr-4.3 in an Acinetobacter baumannii Strain in China. Antimicrobial Agents and Chemotherapy, 63, e00133-19.
https://doi.org/10.1128/AAC.00133-19
[37]  Caselli, E., Accolti, M.D., Soffritti, I., Piffanelli, M. and Mazzacane, S. (2018) Spread of mcr-1—Driven Colistin Resistance on Hospital Surfaces, Italy. Emerging Infectious Diseases, 24, 1752-1753.
https://doi.org/10.3201/eid2409.171386
[38]  Rhouma, M., Thériault, W., Rabhi, N., Duchaine, C., Quessy, S. and Fravalo, P. (2019) First Identification of mcr-1/mcr-2 Genes in the Fecal Microbiota of Canadian Commercial Pigs during the Growing and Finishing Period. Veterinary Medicine: Research and Reports, 10, 65-67.
https://doi.org/10.2147/VMRR.S202331
[39]  Ilsan, N.A., Lee, Y.J., Kuo, S.C., Lee, I.H. and Huang, T.W. (2021) Antimicrobial Resistance Mechanisms and Virulence of Colistin-and Carbapenem-Resistant Acinetobacter baumannii Isolated from a Teaching Hospital in Taiwan. Microorganisms, 9, Article 1295.
https://doi.org/10.3390/microorganisms9061295
[40]  Jayol, A., Poirel, L., Dortet, L. and Nordmann, P. (2016) National Survey of Colistin Resistance among Carbapenemase-Producing Enterobacteriaceae and Outbreak Caused by Colistin-Resistant OXA-48-Producing Klebsiella pneumoniae, France, 2014. Eurosurveillance, 21, Article 30339.
https://doi.org/10.2807/1560-7917.ES.2016.21.37.30339
[41]  Cannatelli, A., Andrea, M.D., Giani, T., Pilato, D., Arena, F., Ambretti, S., et al. (2013) In Vivo Emergence of Colistin Resistance in Klebsiella pneumoniae Producing KPC-Type Carbapenemases Mediated by Insertional Inactivation of the PhoQ/PhoP mgrB Regulator. Antimicrobial Agents and Chemotherapy, 57, 5521-5526.
https://doi.org/10.1128/AAC.01480-13
[42]  Hakemi Vala, M., Hallajzadeh, M., Hashemi, A., Goudarzi, H., Tarhani, M., Sattarzadeh Tabrizi, M. and Bazmi, F. (2014) Detection of Ambler Class A, B and D β-Lactamases among Pseudomonas aeruginosa and Acinetobacter baumannii Clinical Isolates from Burn Patients. Annals of Burns and Fire Disasters, 27, 8-13.
[43]  Monaco, M., Giani, T., Raffone, M., Arena, F., Garcia-Fernandez, A., Pollini, S., et al. (2014) Colistin Resistance Superimposed to Endemic Carbapenem-Resistant Klebsiella pneumoniae: A Rapidly Evolving Problem in Italy, November 2013 to April 2014. Eurosurveillance, 19, 14-18.
https://doi.org/10.2807/1560-7917.ES2014.19.42.20939

Full-Text

Contact Us

[email protected]

QQ:3279437679

WhatsApp +8615387084133